Migrate Nextflow Code
Move pipelines to strict syntax, workflow outputs and static types
Nextflow · Apache-2.0
When
Fixing strict-syntax errors, moving publishDir to workflow outputs, adopting topic channels, or adding static types to an existing pipeline.
The Catch
Nextflow is Apache-2.0 and this runs locally at $0. Bioinformatics-focused; launching on cloud compute (the launch-workflow skill) needs Seqera Platform. Upstream skill id is `migrate-nextflow-code`.
Embed
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Markdown
[](https://stackgems.com/skills/nextflow-migrate-code)